chr2:138964859:G>C Detail (hg38)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr2:139,722,429-139,722,429 View the variant detail on this assembly version. |
| hg38 | chr2:138,964,859-138,964,859 |
HGVS
[No Data.]
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
| JP | HGVD:[No Data.] |
| ToMMo:0.447 | |
| NCBN:[No Data.] | |
| NCBN(Hondo):[No Data.] | |
| NCBN(Ryukyu):[No Data.] | |
| East asia | ExAC:[No Data.] |
Prediction
ClinVar
| Clinical Significance | |
| Review star | [No Data.] |
| Show details | |
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.003 | bronchiolitis | IL10 rs1800896, IFNG rs2430561, and IL18 rs1872387 polymorphims and their associ... | BeFree | 24167151 | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| IL10 rs1800896, IFNG rs2430561, and IL18 rs1872387 polymorphims and their associations with asthma a... | DisGeNET | Detail |
- Gene
- -
- dbSNP
- rs1872387 dbSNP
- Genome
- hg38
- Position
- chr2:138,964,859-138,964,859
- Variant Type
- snv
- Reference Allele
- G
- Alternative Allele
- C
- ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- PASS
- Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- rs1872387
- Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 0.4465
- Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 7484
- Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 16760
Genome browser